BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB019H03SP1|AL427532
(914 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1564 1349 0.0
>3x_Contig1564
Length = 11038
Score = 1349 bits (670), Expect = 0.0
Identities = 842/910 (92%), Gaps = 1/910 (0%)
Strand = Plus / Minus
Query: 5 caagaatyccctggcattcacaagtagcacacattctggtgggggtagtacggccaacga 64
||||||| || ||| |||||||||||||||||||||| || |||||||||||||||||||
Sbjct: 8930 caagaattccttggtattcacaagtagcacacattcttgttggggtagtacggccaacga 8871
Query: 65 aaataagaagtcmagaaagaagctatggcagagtgttgaaggcagagtgtgacggaatga 124
||||||||||| ||||||||| ||||| ||||| ||||||||||| |||||||||||||
Sbjct: 8870 aaataagaagttaagaaagaag-tatggtagagttttgaaggcagattgtgacggaatga 8812
Query: 125 caaacatattcgatgaacgttttgaagaagcaactgagttcatatkggattctttcgaag 184
||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||
Sbjct: 8811 caaacatattcgatgaacgttttgaagaagcaactgatttcatattggattctttcgaag 8752
Query: 185 aatggagtgaatcggaataatdagaaaatcattakaaagaraaarggratkkgaaaagga 244
||||||||||||||||||||| |||| ||||||| ||||| | | | || ||||| |
Sbjct: 8751 aatggagtgaatcggaataattagaatatcattataaagatatatgtaattttaaaagta 8692
Query: 245 aacmaaaakgcactgggaaahcttctttcaaaccctttcatttcttttcgagattggaaa 304
| | || ||||| ||||| |||||||||||| ||||||||||||||||||||||||||
Sbjct: 8691 ttctataatgcacttggaaatcttctttcaaactctttcatttcttttcgagattggaaa 8632
Query: 305 gggcgacccacagaatcttgatcggaatcctgccctttaacttcggattttgcggggckg 364
|||| |||||||||||||||||||||||||||| ||||||||||||||||||| ||||
Sbjct: 8631 gggctacccacagaatcttgatcggaatcctgctctttaacttcggattttgctgggctt 8572
Query: 365 gtgctgaaagarttggcctttaggggtgtaggcttagggggaagagtkggcttcaaadga 424
|| |||||||| || ||||||||| || |||||||||| |||||| | ||||||||| ||
Sbjct: 8571 gttctgaaagattttgcctttaggtgtttaggcttaggtggaagatttggcttcaaatga 8512
Query: 425 gcgggttkggggggcggggcgggtttggattgaggagcctcatgcacaggagtgadcacc 484
|| |||| ||| ||||| || |||||||||| ||||||||||||||||||||||| |||
Sbjct: 8511 gctggtttgggtggcggtgctggtttggatttaggagcctcatgcacaggagtgatcact 8452
Query: 485 gtacttgawtgacgaatggcattggattgadgggggtcagaaatatcggttttcctccca 544
|||||||| | |||| | |||||||||| | || ||||||| ||||||||||||||||||
Sbjct: 8451 gtacttgatttacgatttgcattggatttatggtggtcagatatatcggttttcctccca 8392
Query: 545 atatcagtatatgtcccgtatccagtggcagaagagcgattgggtatatcagctgcattg 604
|||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 8391 atatcagtatatttcccgtatccagtggcagaagagcgattgggtatatcatctgcattg 8332
Query: 605 aatagatctttaacgcgcttctggatcgaagatgaagttttcaaggaagaggatcttctc 664
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8331 attagatctttaacgcgcttctggatcgaagatgaagttttcaaggaagaggatcttctc 8272
Query: 665 agtgatgattttggtttctccttttgtatatcttcgatcaattcatagtcattattttcc 724
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8271 agtgatgattttggtttctccttttgtatatcttcgatcaattcatagtcattattttcc 8212
Query: 725 ggaacgaaggaaaacgagctggtggaccgcctatgggatttggtgttagaagaagtattt 784
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8211 ggaacgaaggaaaacgagctggtggaccgcctatgggatttggtgttagaagaagtattt 8152
Query: 785 tcaggaatggatttgcctgaagtacttctatactttcttgcttctaaagatgattttctg 844
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8151 tcaggaatggatttgcctgaagtacttctatactttcttgcttctaaagatgattttctg 8092
Query: 845 gaactgctatcaccagtgaactgcattgaggaaattccctttcttaatgcgttaaawgcg 904
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 8091 gaactgctatcaccagtgaactgcattgaggaaattccctttcttaatgcgttaaatgcg 8032
Query: 905 ggttttacgc 914
| ||||||||
Sbjct: 8031 gattttacgc 8022
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.40 0.713 1.32
Gapped
Lambda K H
1.40 0.713 1.32
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5492
Number of Sequences: 1807
Number of extensions: 5492
Number of successful extensions: 122
Number of sequences better than 1.0e-20: 1
length of query: 914
length of database: 10,358,551
effective HSP length: 16
effective length of query: 898
effective length of database: 10,329,639
effective search space: 9276015822
effective search space used: 9276015822
T: 0
A: 40
X1: 5 (10.1 bits)
X2: 14 (28.2 bits)
S1: 12 (24.7 bits)
S2: 50 (101.2 bits)